Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
ESCA rs35247427 chr6:145688876 AG/A 2.23E-5 181 13.5 13.22 8.1 KM Plot
ESCA rs35270275 chr6:145689523 C/T 1.29E-5 179 13.5 13.22 7.7 KM Plot
ESCA rs35286517 chr16:1506034 C/A 1.25E-7 181 13.18 13.73 4 KM Plot
ESCA rs35313796 chr16:1503310 G/A 1.25E-7 181 13.18 13.73 4 KM Plot
ESCA rs35331173 chr15:67124457 A/AG 9.86E-5 177 13.38 14.78 6 KM Plot
ESCA rs35331938 chr16:1506318 A/G 1.25E-7 181 13.18 13.73 4 KM Plot
ESCA rs35426123 chr16:1503289 T/C 1.25E-7 181 13.18 13.73 4 KM Plot
ESCA rs35451018 chr4:10039219 T/TA 6.55E-5 179 8.1 14.32 13.37 KM Plot
ESCA rs35525815 chr3:46006269 C/T 0 183 13.33 12.6 0.8 KM Plot
ESCA rs35529716 chr1:87609805 ATTAC/A 1.8E-5 177 9.07 14.85 13.22 KM Plot
ESCA rs35626376 chr6:146072421 G/GT 9.6E-5 184 10.1 13.5 13.57 KM Plot
ESCA rs35704553 chr1:25400592 G/A 5.36E-6 176 13.35 13.03 3.73 KM Plot
ESCA rs35855315 chr3:46006239 A/G 0 183 13.33 12.6 0.8 KM Plot
ESCA rs35915213 chr16:1498775 C/T 1.65E-7 181 13.03 14.12 4 KM Plot
ESCA rs35946413 chr8:120874241 C/CAAA 3.44E-7 183 13 18.6 3.73 KM Plot